Top cofit genes for RR42_RS32060 from Cupriavidus basilensis FW507-4G11

protocatechuate 3,4-dioxygenase
SEED: Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)
KEGG: protocatechuate 3,4-dioxygenase, alpha subunit

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS32065		protocatechuate 3,4-dioxygenase, beta subunit (EC 1.13.11.3) (from data)	0.96	0.93
2	RR42_RS32050		AraC family transcriptional regulator	no	0.75
3	RR42_RS32055		3-carboxymuconate cycloisomerase PcaB (EC 5.5.1.2) (from data)	0.95	0.75
4	RR42_RS29055		AraC family transcriptional regulator	0.83	0.60
5	RR42_RS35925		3-oxoadipate CoA-transferase	0.91	0.59
6	RR42_RS32070		LysR family transcriptional regulator	0.93	0.54
7	RR42_RS21205		2-isopropylmalate synthase	0.24	0.53
8	RR42_RS01400		5-formyltetrahydrofolate cyclo-ligase	0.24	0.48
9	RR42_RS35915		beta-ketoadipyl CoA thiolase	0.92	0.48
10	RR42_RS03030		required for 4-hydroxybenzoate transport, together with NodT, MFP, and FUSC proteins (RR42_RS03040, RR42_RS03035, and RR42_RS03025) (from data)	no	0.48
11	RR42_RS32565		MFS transporter	no	0.46
12	RR42_RS05985		esterase	0.70	0.45
13	RR42_RS03040		Outer membrane protein (NodT-like) required for 4-hydroxybenzoate transport, together with FUSC, MFP, and DUF1656 proteins (RR42_RS03025, RR42_RS03035, and RR42_RS03030) (from data)	no	0.45
14	RR42_RS03025		Inner membrane protein (FUSC-like) required for 4-hydroxybenzoate transport, together with NodT, MFP, and DUF1656 proteins (RR42_RS03040, RR42_RS03035, and RR42_RS03030) (from data)	0.43	0.43
15	RR42_RS02495		cardiolipin synthase; exported protein	0.34	0.42
16	RR42_RS05210		malic enzyme	no	0.41
17	RR42_RS34380		dihydrolipoamide dehydrogenase	no	0.39
18	RR42_RS26555		tRNA-Met	no	0.37
19	RR42_RS06010		phosphotyrosine protein phosphatase	no	0.35
20	RR42_RS32890		ABC transporter permease	0.34	0.35

Or look for negative cofitness