Top cofit genes for RR42_RS31290 from Cupriavidus basilensis FW507-4G11

XRE family transcriptional regulator
SEED: Helix-turn-helix motif

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS05430		DNA-directed RNA polymerase sigma-70 factor	no	0.56
2	RR42_RS08415		hypothetical protein	no	0.56
3	RR42_RS13180		3'-5' exonuclease	no	0.54
4	RR42_RS13190		outer membrane metallopeptidase lipoprotein nlpD	no	0.54
5	RR42_RS08430		hypothetical protein	no	0.54
6	RR42_RS28145		LysR family transcriptional regulator	no	0.54
7	RR42_RS05350		tungsten ABC transporter substrate-binding protein	no	0.53
8	RR42_RS31285		XRE family transcriptional regulator	no	0.52
9	RR42_RS08435		hypothetical protein	no	0.51
10	RR42_RS08345		baseplate protein	no	0.51
11	RR42_RS27645		hypothetical protein	no	0.50
12	RR42_RS08125		hypothetical protein	no	0.49
13	RR42_RS08235		terminase	no	0.49
14	RR42_RS21680		hypothetical protein	no	0.49
15	RR42_RS04655		glycosyl transferase	no	0.49
16	RR42_RS33260		multidrug MFS transporter	no	0.49
17	RR42_RS20640		TetR family transcriptional regulator	no	0.48
18	RR42_RS08295		hypothetical protein	no	0.48
19	RR42_RS19310		ATP-dependent DNA helicase RecQ	no	0.48
20	RR42_RS08360		hypothetical protein	no	0.48

Or look for negative cofitness