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Cofit
Protein
Homologs
Top cofit genes for RR42_RS30640 from
Cupriavidus basilensis FW507-4G11
DNA mismatch repair protein MutT
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS16280
transcriptional regulator
no
0.78
2
RR42
_RS04470
prephenate dehydrogenase
no
0.74
3
RR42
_RS30655
LysR family transcriptional regulator
0.67
0.73
4
RR42
_RS30660
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
0.68
0.73
5
RR42
_RS16255
sulfate adenylyltransferase
0.65
0.72
6
RR42
_RS16250
sulfate adenylyltransferase
0.66
0.70
7
RR42
_RS01160
homoserine O-acetyltransferase
no
0.70
8
RR42
_RS17645
shikimate dehydrogenase
0.66
0.70
9
RR42
_RS16265
required for sulfate utilization, putative electron transport protein for sulfite reductase
(from data)
no
0.70
10
RR42
_RS16270
sulfite reductase
0.65
0.68
11
RR42
_RS19010
shikimate kinase
no
0.67
12
RR42
_RS04475
3-phosphoshikimate 1-carboxyvinyltransferase
0.67
0.66
13
RR42
_RS05990
aromatic amino acid aminotransferase
no
0.65
14
RR42
_RS06485
chorismate synthase
no
0.65
15
RR42
_RS01380
membrane protein
no
0.64
16
RR42
_RS16275
membrane protein
no
0.64
17
RR42
_RS18295
anthranilate synthase component I
0.63
0.63
18
RR42
_RS14320
O-succinylhomoserine sulfhydrylase
no
0.62
19
RR42
_RS01290
thiamine biosynthesis protein ThiC
no
0.62
20
RR42
_RS16245
uroporphyrin-III methyltransferase
0.65
0.61
Or look for
negative cofitness