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Cofit
Protein
Homologs
Top cofit genes for RR42_RS30385 from
Cupriavidus basilensis FW507-4G11
membrane protein
SEED: Outer membrane protein (porin)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS32340
hypothetical protein
no
0.35
2
RR42
_RS16835
6-phosphogluconate dehydrogenase
no
0.35
3
RR42
_RS35830
hypothetical protein
no
0.34
4
RR42
_RS03275
membrane protein
no
0.34
5
RR42
_RS29095
XRE family transcriptional regulator
no
0.34
6
RR42
_RS00775
methionine synthase
no
0.34
7
RR42
_RS31075
MFS transporter
no
0.33
8
RR42
_RS21855
hypothetical protein
no
0.33
9
RR42
_RS37010
cyclase
no
0.33
10
RR42
_RS07365
pyruvate dehydrogenase
no
0.32
11
RR42
_RS25585
membrane protein
no
0.32
12
RR42
_RS32875
hypothetical protein
no
0.32
13
RR42
_RS27955
Short chain fatty acid transporter
no
0.31
14
RR42
_RS16885
type 4 fimbrial biogenesis PilY1 signal peptide
no
0.31
15
RR42
_RS02865
chloride channel protein
no
0.31
16
RR42
_RS29270
AraC family transcriptional regulator
no
0.31
17
RR42
_RS26150
hypothetical protein
no
0.31
18
RR42
_RS19550
hypothetical protein
no
0.31
19
RR42
_RS08275
hypothetical protein
no
0.31
20
RR42
_RS19915
SPFH domain/Band 7 family protein 2
no
0.31
Or look for
negative cofitness