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  • Top cofit genes for RR42_RS30200 from Cupriavidus basilensis FW507-4G11

    aromatic acid decarboxylase
    SEED: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
    KEGG: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS25650 hypothetical protein no 0.41
    2 RR42_RS30095 alcohol dehydrogenase no 0.35
    3 RR42_RS29075 LysR family transcriptional regulator no 0.33
    4 RR42_RS29035 acyl-CoA synthetase no 0.32
    5 RR42_RS35690 flagellar P-ring protein FlgI no 0.32
    6 RR42_RS26880 ABC transporter substrate-binding protein no 0.32
    7 RR42_RS01470 hypothetical protein no 0.31
    8 RR42_RS06865 hypothetical protein no 0.31
    9 RR42_RS35035 poly(3-hydroxybutyrate) depolymerase no 0.31
    10 RR42_RS25200 TetR family transcriptional regulator no 0.31
    11 RR42_RS03420 bile acid:sodium symporter no 0.30
    12 RR42_RS11925 hypothetical protein no 0.29
    13 RR42_RS08185 hypothetical protein no 0.29
    14 RR42_RS25380 acetyl-CoA acetyltransferase no 0.29
    15 RR42_RS36770 hypothetical protein no 0.29
    16 RR42_RS27145 hypothetical protein no 0.29
    17 RR42_RS24490 hypothetical protein no 0.28
    18 RR42_RS07330 histidine utilization repressor no 0.28
    19 RR42_RS06235 peptidase M50 no 0.28
    20 RR42_RS29000 Crp/Fnr family transcriptional regulator no 0.28

    Or look for negative cofitness