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  • Top cofit genes for RR42_RS29420 from Cupriavidus basilensis FW507-4G11

    3-methylcrotonyl-CoA carboxylase
    SEED: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
    KEGG: geranyl-CoA carboxylase alpha subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS29410 acetyl-CoA carboxylase 0.55 0.70
    2 RR42_RS29865 hypothetical protein no 0.57
    3 RR42_RS22495 hypothetical protein no 0.57
    4 RR42_RS26840 DNA-binding protein no 0.56
    5 RR42_RS15155 CoA-transferase 0.56 0.55
    6 RR42_RS22490 IclR family transcriptional regulator no 0.54
    7 RR42_RS21260 isovaleryl-CoA dehydrogenase 0.46 0.53
    8 RR42_RS35920 3-oxoadipate CoA-transferase no 0.52
    9 RR42_RS36125 IclR family transcriptional regulator no 0.50
    10 RR42_RS11095 3-hydroxyacyl-CoA dehydrogenase no 0.47
    11 RR42_RS35910 short-chain dehydrogenase no 0.45
    12 RR42_RS12610 glutaminase no 0.44
    13 RR42_RS36645 acyl-CoA dehydrogenase no 0.44
    14 RR42_RS27395 GntR family transcriptional regulator no 0.44
    15 RR42_RS21255 LysR family transcriptional regulator no 0.44
    16 RR42_RS02900 LysR family transcriptional regulator no 0.43
    17 RR42_RS29970 IclR family transcriptional regulator no 0.42
    18 RR42_RS36635 long-chain fatty acid--CoA ligase no 0.40
    19 RR42_RS17280 ATP--cobalamin adenosyltransferase no 0.40
    20 RR42_RS11540 TonB-dependent receptor no 0.40

    Or look for negative cofitness