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Cofit
Protein
Homologs
Top cofit genes for RR42_RS29290 from
Cupriavidus basilensis FW507-4G11
diguanylate cyclase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS09445
LysR family transcriptional regulator
no
0.38
2
RR42
_RS24785
NAD-dependent dehydratase
no
0.37
3
RR42
_RS35810
flagellar motor protein MotB
no
0.36
4
RR42
_RS26765
polyketide cyclase
no
0.35
5
RR42
_RS32945
hypothetical protein
no
0.34
6
RR42
_RS24795
butyryl-CoA dehydrogenase
no
0.33
7
RR42
_RS21520
flagellar brake protein
no
0.33
8
RR42
_RS35035
poly(3-hydroxybutyrate) depolymerase
no
0.32
9
RR42
_RS25825
histidine kinase
no
0.32
10
RR42
_RS06010
phosphotyrosine protein phosphatase
no
0.31
11
RR42
_RS10710
short-chain fatty acid transporter
no
0.31
12
RR42
_RS18165
carbamoyl-phosphate synthase large subunit
no
0.31
13
RR42
_RS12345
hypothetical protein
no
0.30
14
RR42
_RS19900
MerR family transcriptional regulator
no
0.30
15
RR42
_RS37510
hypothetical protein
no
0.30
16
RR42
_RS13195
protein-L-isoaspartate O-methyltransferase
no
0.30
17
RR42
_RS09930
plasmid stability protein StbB
no
0.30
18
RR42
_RS10855
diguanylate phosphodiesterase
no
0.30
19
RR42
_RS09760
hypothetical protein
no
0.30
20
RR42
_RS05315
fatty acid desaturase
no
0.29
Or look for
negative cofitness