Top cofit genes for RR42_RS28880 from Cupriavidus basilensis FW507-4G11

hypothetical protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS21435		hypothetical protein	no	0.45
2	RR42_RS01380		membrane protein	no	0.43
3	RR42_RS37410		PaaX family transcriptional regulator	no	0.42
4	RR42_RS19005		3-dehydroquinate synthase	no	0.42
5	RR42_RS05860		phospho-2-dehydro-3-deoxyheptonate aldolase	no	0.41
6	RR42_RS04475		3-phosphoshikimate 1-carboxyvinyltransferase	no	0.39
7	RR42_RS32895		ABC transporter permease	no	0.38
8	RR42_RS16270		sulfite reductase	no	0.37
9	RR42_RS06630		integration host factor subunit alpha	no	0.37
10	RR42_RS35010		GntR family transcriptional regulator	no	0.37
11	RR42_RS11925		hypothetical protein	no	0.37
12	RR42_RS14390		3-isopropylmalate dehydratase	no	0.37
13	RR42_RS14360		tryptophan synthase subunit alpha	no	0.37
14	RR42_RS16250		sulfate adenylyltransferase	no	0.37
15	RR42_RS06485		chorismate synthase	no	0.36
16	RR42_RS35630		ArsR family transcriptional regulator	no	0.36
17	RR42_RS25905		acetyl-CoA acetyltransferase	no	0.36
18	RR42_RS01160		homoserine O-acetyltransferase	no	0.36
19	RR42_RS14385		3-isopropylmalate dehydrogenase	no	0.36
20	RR42_RS10025		muconolactone delta-isomerase	no	0.36

Or look for negative cofitness