Top cofit genes for RR42_RS28855 from Cupriavidus basilensis FW507-4G11

amino acid deaminase
SEED: low-specificity D-threonine aldolase
KEGG: D-serine dehydratase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS19860		tartronate semialdehyde reductase	no	0.44
2	RR42_RS31540		RND transporter	0.33	0.42
3	RR42_RS21870		transcriptional regulator	no	0.42
4	RR42_RS24700		glucose-methanol-choline oxidoreductase	no	0.40
5	RR42_RS31005		homospermidine synthase	no	0.39
6	RR42_RS07130		hypothetical protein	no	0.38
7	RR42_RS13685		cupin	0.37	0.37
8	RR42_RS28735		hemolysin III	no	0.37
9	RR42_RS33950		dihydroxy-acid dehydratase	no	0.37
10	RR42_RS24600		phytanoyl-CoA dioxygenase	no	0.37
11	RR42_RS22380		hypothetical protein	no	0.37
12	RR42_RS00685		iron ABC transporter ATP-binding protein	no	0.36
13	RR42_RS05905		hypothetical protein	no	0.36
14	RR42_RS10715		hypothetical protein	no	0.36
15	RR42_RS11895		membrane protein	no	0.36
16	RR42_RS30465		monovalent cation/H+ antiporter subunit A	no	0.36
17	RR42_RS13565		lytic transglycosylase	no	0.35
18	RR42_RS30280		alpha/beta hydrolase	no	0.35
19	RR42_RS09820		hypothetical protein	no	0.35
20	RR42_RS26220		citrate lyase subunit beta	no	0.34

Or look for negative cofitness