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Cofit
Protein
Homologs
Top cofit genes for RR42_RS28615 from
Cupriavidus basilensis FW507-4G11
ABC transporter substrate-binding protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS21695
DNA-binding protein
no
0.52
2
RR42
_RS02045
GTPase
no
0.50
3
RR42
_RS04895
serine/threonine protein phosphatase
no
0.50
4
RR42
_RS17060
histidine kinase
no
0.49
5
RR42
_RS17055
LuxR family transcriptional regulator
no
0.48
6
RR42
_RS23585
hypothetical protein
no
0.47
7
RR42
_RS06540
hypothetical protein
no
0.47
8
RR42
_RS17625
damage-inducible protein CinA
no
0.44
9
RR42
_RS33180
hypothetical protein
no
0.44
10
RR42
_RS10845
cupin
no
0.43
11
RR42
_RS13690
short-chain dehydrogenase
no
0.43
12
RR42
_RS04280
aldehyde dehydrogenase
no
0.43
13
RR42
_RS11235
peptide ABC transporter substrate-binding protein
no
0.43
14
RR42
_RS04265
chemotaxis protein CheY
no
0.43
15
RR42
_RS35630
ArsR family transcriptional regulator
no
0.42
16
RR42
_RS09505
fatty acid hydroxylase
no
0.42
17
RR42
_RS05045
hypothetical protein
no
0.42
18
RR42
_RS07520
4-hydroxybenzoate--CoA ligase
no
0.42
19
RR42
_RS17635
magnesium transporter CorA
no
0.42
20
RR42
_RS31145
RNA polymerase sigma factor
no
0.42
Or look for
negative cofitness