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Cofit
Protein
Homologs
Top cofit genes for RR42_RS28570 from
Cupriavidus basilensis FW507-4G11
AraC family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS26905
methylcrotonoyl-CoA carboxylase
0.77
0.50
2
RR42
_RS00955
hydroxymethylglutaryl-CoA lyase
0.48
0.49
3
RR42
_RS01895
MFS transporter
no
0.46
4
RR42
_RS03385
sugar kinase
no
0.46
5
RR42
_RS06555
3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A
(from data)
0.67
0.45
6
RR42
_RS26895
3-methylcrotonyl-CoA carboxylase
0.73
0.45
7
RR42
_RS01915
cytochrome C oxidase subunit I
no
0.44
8
RR42
_RS28565
acyl-CoA dehydrogenase
0.73
0.44
9
RR42
_RS18820
cytochrome B
no
0.43
10
RR42
_RS18815
cytochrome C
no
0.43
11
RR42
_RS01910
cytochrome C oxidase subunit I
no
0.43
12
RR42
_RS28560
methylmalonate-semialdehyde dehydrogenase
no
0.42
13
RR42
_RS18000
cell division protein ZapD
no
0.42
14
RR42
_RS14775
peptidase M48
no
0.42
15
RR42
_RS01880
cytochrome oxidase subunit I
no
0.41
16
RR42
_RS20020
cytochrome C
no
0.41
17
RR42
_RS07870
alkyl hydroperoxide reductase
no
0.41
18
RR42
_RS01885
cytochrome C oxidase assembly protein
no
0.40
19
RR42
_RS15950
formate dehydrogenase
no
0.39
20
RR42
_RS01095
membrane protein
no
0.39
Or look for
negative cofitness