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Cofit
Protein
Homologs
Top cofit genes for RR42_RS28290 from
Cupriavidus basilensis FW507-4G11
DNA-binding protein
SEED: Transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS03990
aspartate:proton symporter Glt
(from data)
no
0.54
2
RR42
_RS03985
histidine kinase
no
0.51
3
RR42
_RS08085
hypothetical protein
no
0.51
4
RR42
_RS34320
IclR family transcriptional regulator
0.61
0.48
5
RR42
_RS05425
membrane protein
no
0.48
6
RR42
_RS27055
membrane protein
no
0.44
7
RR42
_RS28525
PadR family transcriptional regulator
no
0.44
8
RR42
_RS19420
hypothetical protein
no
0.43
9
RR42
_RS10440
heat-shock protein
no
0.42
10
RR42
_RS17610
malate dehydrogenase
no
0.41
11
RR42
_RS34550
hypothetical protein
no
0.41
12
RR42
_RS03980
Fis family transcriptional regulator
0.23
0.40
13
RR42
_RS27700
hypothetical protein
no
0.40
14
RR42
_RS10980
hydroxypyruvate isomerase
no
0.39
15
RR42
_RS37530
hypothetical protein
no
0.38
16
RR42
_RS17230
phosphoserine phosphatase
0.28
0.38
17
RR42
_RS17235
poly(A) polymerase
no
0.38
18
RR42
_RS04300
nitrogen regulatory protein P-II 1
no
0.38
19
RR42
_RS14985
30S ribosomal protein S21
no
0.37
20
RR42
_RS28185
GntR family transcriptional regulator
no
0.37
Or look for
negative cofitness