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Cofit
Protein
Homologs
Top cofit genes for RR42_RS26875 from
Cupriavidus basilensis FW507-4G11
LysR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS29500
acyl-CoA dehydrogenase
no
0.46
2
RR42
_RS28395
DNA-binding protein
no
0.46
3
RR42
_RS32710
hypothetical protein
no
0.42
4
RR42
_RS29630
hypothetical protein
no
0.41
5
RR42
_RS25115
IclR family transcriptional regulator
no
0.41
6
RR42
_RS04685
lipoprotein
no
0.41
7
RR42
_RS19035
pilus assembly protein PilM
no
0.41
8
RR42
_RS12235
terminase
no
0.40
9
RR42
_RS32795
DNA polymerase III subunit alpha
no
0.40
10
RR42
_RS13685
cupin
no
0.40
11
RR42
_RS31050
3-hydroxyacyl-CoA dehydrogenase
no
0.40
12
RR42
_RS22000
histidine kinase
no
0.39
13
RR42
_RS04805
pirin
no
0.39
14
RR42
_RS06855
hypothetical protein
no
0.38
15
RR42
_RS00310
TetR family transcriptional regulator
no
0.38
16
RR42
_RS34500
PST polysaccharide transporter
no
0.37
17
RR42
_RS32005
flavin-dependent monooxygenase
no
0.37
18
RR42
_RS17495
hypothetical protein
no
0.37
19
RR42
_RS13625
4-hydroxybenzoyl-CoA reductase
no
0.37
20
RR42
_RS36830
antibiotic biosynthesis monooxygenase
no
0.37
Or look for
negative cofitness