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  • Top cofit genes for RR42_RS26435 from Cupriavidus basilensis FW507-4G11

    ferredoxin
    SEED: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
    KEGG: ferredoxin subunit of phenylpropionate dioxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS19420 hypothetical protein no 0.50
    2 RR42_RS27055 membrane protein no 0.42
    3 RR42_RS32195 hypothetical protein no 0.41
    4 RR42_RS34320 IclR family transcriptional regulator 0.14 0.41
    5 RR42_RS15430 peptidase no 0.41
    6 RR42_RS00285 thiamine biosynthesis protein ThiS no 0.41
    7 RR42_RS04375 magnesium transporter no 0.41
    8 RR42_RS18940 ABC transporter ATP-binding protein no 0.41
    9 RR42_RS20745 LysR family transcriptional regulator no 0.39
    10 RR42_RS05045 hypothetical protein no 0.38
    11 RR42_RS13615 4-hydroxybenzoyl-CoA reductase no 0.38
    12 RR42_RS04280 aldehyde dehydrogenase no 0.38
    13 RR42_RS28205 hypothetical protein no 0.37
    14 RR42_RS27700 hypothetical protein no 0.37
    15 RR42_RS08880 hypothetical protein no 0.37
    16 RR42_RS33600 oxidoreductase no 0.37
    17 RR42_RS14610 lactate permease no 0.36
    18 RR42_RS22455 2-aminoethylphosphonate aminotransferase 0.21 0.35
    19 RR42_RS18700 membrane protein no 0.35
    20 RR42_RS17610 malate dehydrogenase no 0.35

    Or look for negative cofitness