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Cofit
Protein
Homologs
Top cofit genes for RR42_RS24215 from
Cupriavidus basilensis FW507-4G11
hypothetical protein
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS36405
LuxR family transcriptional regulator
no
0.33
2
RR42
_RS26945
2-hydroxy-3-oxopropionate reductase
no
0.33
3
RR42
_RS20415
ABC transporter substrate-binding protein
no
0.33
4
RR42
_RS35545
PhoU family transcriptional regulator
no
0.32
5
RR42
_RS24330
IclR family transcriptional regulator
no
0.31
6
RR42
_RS37140
hypothetical protein
no
0.30
7
RR42
_RS12610
glutaminase
no
0.30
8
RR42
_RS29695
hypothetical protein
no
0.29
9
RR42
_RS03580
hypothetical protein
no
0.29
10
RR42
_RS11030
alpha/beta hydrolase
no
0.29
11
RR42
_RS12365
hypothetical protein
no
0.29
12
RR42
_RS21755
shikimate dehydrogenase
no
0.29
13
RR42
_RS29705
hypothetical protein
no
0.29
14
RR42
_RS11300
epimerase
no
0.29
15
RR42
_RS25445
hypothetical protein
no
0.29
16
RR42
_RS09415
allantoate amidohydrolase
no
0.28
17
RR42
_RS00080
hypothetical protein
no
0.28
18
RR42
_RS24690
hypothetical protein
no
0.28
19
RR42
_RS35350
copper ABC transporter ATPase
no
0.27
20
RR42
_RS27830
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
no
0.27
Or look for
negative cofitness