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Cofit
Protein
Homologs
Top cofit genes for RR42_RS24040 from
Cupriavidus basilensis FW507-4G11
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS34650
LacI family transcriptional regulator
no
0.44
2
RR42
_RS23685
transcriptional regulator
no
0.43
3
RR42
_RS31710
HxlR family transcriptional regulator
no
0.42
4
RR42
_RS15045
pyridine nucleotide-disulfide oxidoreductase
no
0.41
5
RR42
_RS33575
hypothetical protein
no
0.40
6
RR42
_RS28315
GntR family transcriptional regulator
no
0.39
7
RR42
_RS24235
hypothetical protein
no
0.37
8
RR42
_RS19005
3-dehydroquinate synthase
no
0.36
9
RR42
_RS24605
TetR family transcriptional regulator
no
0.36
10
RR42
_RS10370
ABC transporter
no
0.36
11
RR42
_RS20210
16S rRNA methyltransferase
no
0.36
12
RR42
_RS19410
GntR family transcriptional regulator
no
0.35
13
RR42
_RS14360
tryptophan synthase subunit alpha
no
0.35
14
RR42
_RS30520
gentisate 1,2-dioxygenase
no
0.35
15
RR42
_RS15490
NrdR family transcriptional regulator
no
0.35
16
RR42
_RS04475
3-phosphoshikimate 1-carboxyvinyltransferase
no
0.35
17
RR42
_RS16275
membrane protein
no
0.35
18
RR42
_RS30620
plasmid stabilization protein
no
0.34
19
RR42
_RS27095
hypothetical protein
no
0.33
20
RR42
_RS28830
hypothetical protein
no
0.33
Or look for
negative cofitness