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Cofit
Protein
Homologs
Top cofit genes for RR42_RS23860 from
Cupriavidus basilensis FW507-4G11
lytic transglycosylase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS18475
membrane protein
no
0.42
2
RR42
_RS11035
hypothetical protein
no
0.40
3
RR42
_RS24770
NADH:flavin oxidoreductase
no
0.37
4
RR42
_RS15520
hypothetical protein
0.29
0.35
5
RR42
_RS33555
secretion protein HlyD
0.26
0.35
6
RR42
_RS30945
cytochrome C peroxidase
no
0.35
7
RR42
_RS35725
flagellar biosynthesis protein FlgB
no
0.35
8
RR42
_RS21870
transcriptional regulator
no
0.35
9
RR42
_RS09760
hypothetical protein
no
0.34
10
RR42
_RS30950
cation transporter
no
0.34
11
RR42
_RS11045
short-chain dehydrogenase
no
0.33
12
RR42
_RS33085
ligand-gated channel protein
no
0.33
13
RR42
_RS28915
membrane protein
no
0.33
14
RR42
_RS34890
hypothetical protein
no
0.33
15
RR42
_RS34435
transferase
no
0.33
16
RR42
_RS29425
enoyl-CoA hydratase
no
0.33
17
RR42
_RS32430
SAM-dependent methyltransferase
no
0.32
18
RR42
_RS13935
hemin transporter
no
0.32
19
RR42
_RS01025
GTPase
no
0.32
20
RR42
_RS13470
phosphate ABC transporter substrate-binding protein
no
0.32
Or look for
negative cofitness