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Cofit
Protein
Homologs
Top cofit genes for RR42_RS23055 from
Cupriavidus basilensis FW507-4G11
ABC transporter substrate-binding protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS00925
adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA
no
0.52
2
RR42
_RS00930
8-amino-7-oxononanoate synthase
no
0.49
3
RR42
_RS29315
AcrR family transcriptional regulator
no
0.47
4
RR42
_RS00940
biotin synthase
no
0.47
5
RR42
_RS15280
long-chain fatty acid--CoA ligase
no
0.47
6
RR42
_RS00420
hypothetical protein
no
0.44
7
RR42
_RS23050
4-oxalomesaconate tautomerase
no
0.43
8
RR42
_RS16415
TetR family transcriptional regulator
no
0.43
9
RR42
_RS03040
Outer membrane protein (NodT-like) required for 4-hydroxybenzoate transport, together with FUSC, MFP, and DUF1656 proteins (RR42_RS03025, RR42_RS03035, and RR42_RS03030)
(from data)
no
0.43
10
RR42
_RS31775
HxlR family transcriptional regulator
no
0.41
11
RR42
_RS03030
required for 4-hydroxybenzoate transport, together with NodT, MFP, and FUSC proteins (RR42_RS03040, RR42_RS03035, and RR42_RS03025)
(from data)
no
0.40
12
RR42
_RS25580
haloacid dehalogenase
no
0.40
13
RR42
_RS10370
ABC transporter
no
0.39
14
RR42
_RS01920
protoheme IX farnesyltransferase
no
0.39
15
RR42
_RS03025
Inner membrane protein (FUSC-like) required for 4-hydroxybenzoate transport, together with NodT, MFP, and DUF1656 proteins (RR42_RS03040, RR42_RS03035, and RR42_RS03030)
(from data)
no
0.38
16
RR42
_RS04375
magnesium transporter
no
0.38
17
RR42
_RS18970
toluene ABC transporter ATP-binding protein
no
0.37
18
RR42
_RS17010
L-aspartate oxidase
no
0.37
19
RR42
_RS18965
ABC transporter permease
0.27
0.36
20
RR42
_RS18960
ABC transporter substrate-binding protein
0.25
0.36
Or look for
negative cofitness