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Cofit
Protein
Homologs
Top cofit genes for RR42_RS22335 from
Cupriavidus basilensis FW507-4G11
hemagglutinin
SEED: PE_PGRS family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS34120
hypothetical protein
no
0.37
2
RR42
_RS33705
LysR family transcriptional regulator
no
0.36
3
RR42
_RS05610
dehydratase
no
0.36
4
RR42
_RS24135
hypothetical protein
no
0.33
5
RR42
_RS23345
hypothetical protein
no
0.32
6
RR42
_RS05620
esterase
no
0.31
7
RR42
_RS19785
allantoate amidohydrolase
no
0.31
8
RR42
_RS32900
sugar ABC transporter ATPase
no
0.31
9
RR42
_RS22635
membrane protein
no
0.31
10
RR42
_RS30800
sugar ABC transporter ATP-binding protein
no
0.31
11
RR42
_RS36035
TonB-dependent receptor
no
0.30
12
RR42
_RS35350
copper ABC transporter ATPase
no
0.30
13
RR42
_RS36210
MFS transporter
no
0.30
14
RR42
_RS16625
hypothetical protein
no
0.30
15
RR42
_RS26310
microcystin LR degradation protein MlrC
no
0.30
16
RR42
_RS03995
diguanylate cyclase
no
0.29
17
RR42
_RS26475
Asp/Glu racemase
no
0.29
18
RR42
_RS04295
hypothetical protein
no
0.29
19
RR42
_RS07680
ABC transporter substrate-binding protein
no
0.28
20
RR42
_RS26635
2-hydroxyacid dehydrogenase
no
0.28
Or look for
negative cofitness