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  • Top cofit genes for RR42_RS21255 from Cupriavidus basilensis FW507-4G11

    LysR family transcriptional regulator
    SEED: Transcriptional regulators, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS36125 IclR family transcriptional regulator 0.54 0.84
    2 RR42_RS29970 IclR family transcriptional regulator no 0.83
    3 RR42_RS22490 IclR family transcriptional regulator no 0.82
    4 RR42_RS22495 hypothetical protein no 0.79
    5 RR42_RS35920 3-oxoadipate CoA-transferase no 0.79
    6 RR42_RS15155 CoA-transferase no 0.79
    7 RR42_RS36595 acyl-CoA dehydrogenase no 0.77
    8 RR42_RS35910 short-chain dehydrogenase no 0.74
    9 RR42_RS11095 3-hydroxyacyl-CoA dehydrogenase no 0.73
    10 RR42_RS26840 DNA-binding protein 0.23 0.70
    11 RR42_RS24350 malyl-CoA thiolesterase no 0.68
    12 RR42_RS29865 hypothetical protein no 0.68
    13 RR42_RS21260 isovaleryl-CoA dehydrogenase no 0.68
    14 RR42_RS35945 DNA-binding protein no 0.66
    15 RR42_RS36635 long-chain fatty acid--CoA ligase no 0.62
    16 RR42_RS36645 acyl-CoA dehydrogenase no 0.62
    17 RR42_RS29410 acetyl-CoA carboxylase no 0.61
    18 RR42_RS07605 poly-beta-hydroxybutyrate polymerase no 0.61
    19 RR42_RS02080 ribosome hibernation promoting factor 0.58 0.59
    20 RR42_RS35930 DNA repair exonuclease no 0.59

    Or look for negative cofitness