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  • Top cofit genes for RR42_RS21205 from Cupriavidus basilensis FW507-4G11

    2-isopropylmalate synthase
    SEED: 2-isopropylmalate synthase (EC 2.3.3.13)
    KEGG: 2-isopropylmalate synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS34380 dihydrolipoamide dehydrogenase no 0.59
    2 RR42_RS32065 protocatechuate 3,4-dioxygenase, beta subunit (EC 1.13.11.3) (from data) no 0.55
    3 RR42_RS32565 MFS transporter no 0.55
    4 RR42_RS32060 protocatechuate 3,4-dioxygenase 0.27 0.53
    5 RR42_RS32465 3-phenylpropionic acid transporter no 0.47
    6 RR42_RS34385 glutathione peroxidase no 0.44
    7 RR42_RS29330 hypothetical protein no 0.42
    8 RR42_RS24760 hypothetical protein no 0.41
    9 RR42_RS22760 GntR family transcriptional regulator no 0.41
    10 RR42_RS20525 LuxR family transcriptional regulator 0.41 0.41
    11 RR42_RS06010 phosphotyrosine protein phosphatase no 0.41
    12 RR42_RS32755 IclR family transcriptional regulator no 0.40
    13 RR42_RS34670 oxidoreductase no 0.40
    14 RR42_RS23220 MarR family transcriptional regulator no 0.40
    15 RR42_RS25200 TetR family transcriptional regulator no 0.39
    16 RR42_RS09835 chemotaxis protein no 0.39
    17 RR42_RS09310 IclR family transcriptional regulator no 0.39
    18 RR42_RS21595 IclR family transcriptional regulator no 0.39
    19 RR42_RS31525 threonine transporter no 0.39
    20 RR42_RS32580 GntR family transcriptional regulator no 0.38

    Or look for negative cofitness