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  • Top cofit genes for RR42_RS20530 from Cupriavidus basilensis FW507-4G11

    phosphoenolpyruvate carboxykinase
    SEED: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
    KEGG: phosphoenolpyruvate carboxykinase (GTP)

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS11140 ABC transporter permease 0.46 0.39
    2 RR42_RS21530 IclR family transcriptional regulator no 0.38
    3 RR42_RS21430 alpha-ketoglutarate permease no 0.37
    4 RR42_RS23440 hypothetical protein no 0.37
    5 RR42_RS27020 gluconolactonase no 0.36
    6 RR42_RS11135 branched-chain amino acid ABC transporter substrate-binding protein no 0.36
    7 RR42_RS11130 mannosyltransferase no 0.35
    8 RR42_RS28800 isocitrate dehydrogenase 0.68 0.34
    9 RR42_RS11150 branched-chain amino acid ABC transporter substrate-binding protein no 0.34
    10 RR42_RS07550 ABC transporter no 0.34
    11 RR42_RS34750 hypothetical protein no 0.33
    12 RR42_RS36695 heavy metal resistance protein CzcA no 0.32
    13 RR42_RS32720 glyoxalase no 0.31
    14 RR42_RS13965 LysR family transcriptional regulator no 0.31
    15 RR42_RS35905 LacI family transcriptional regulator 0.23 0.31
    16 RR42_RS26775 RNA polymerase subunit sigma-24 0.31 0.30
    17 RR42_RS36300 IclR family transcriptional regulator no 0.30
    18 RR42_RS14795 quercetin 2,3-dioxygenase no 0.30
    19 RR42_RS30360 cytochrome C signal peptide protein no 0.29
    20 RR42_RS35725 flagellar biosynthesis protein FlgB 0.33 0.29

    Or look for negative cofitness