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Cofit
Protein
Homologs
Top cofit genes for RR42_RS19055 from
Cupriavidus basilensis FW507-4G11
sulfite oxidase
SEED: FIG001196: Membrane protein YedZ
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS19060
sulfoxide reductase catalytic subunit YedY
0.87
0.68
2
RR42
_RS01120
RNA polymerase sigma factor
no
0.62
3
RR42
_RS11165
methionine sulfoxide reductase B
0.23
0.41
4
RR42
_RS02525
enoyl-CoA hydratase
0.33
0.40
5
RR42
_RS15335
peptide methionine sulfoxide reductase
0.50
0.40
6
RR42
_RS13760
copper resistance protein CopQ
no
0.36
7
RR42
_RS06495
FAD-dependent oxidoreductase
0.50
0.34
8
RR42
_RS07880
histidine kinase
no
0.34
9
RR42
_RS03840
molybdate ABC transporter substrate-binding protein
0.89
0.34
10
RR42
_RS13645
MFS transporter
no
0.33
11
RR42
_RS03835
molybdate ABC transporter permease
0.93
0.33
12
RR42
_RS28285
cytochrome D ubiquinol oxidase subunit I
0.35
0.32
13
RR42
_RS02510
3-hydroxyacyl-CoA dehydrogenase
no
0.31
14
RR42
_RS25840
ArsR family transcriptional regulator
no
0.31
15
RR42
_RS20715
4-hydroxyacetophenone monooxygenase
no
0.31
16
RR42
_RS12435
membrane protein
no
0.30
17
RR42
_RS06815
hypothetical protein
no
0.30
18
RR42
_RS18705
phage/plasmid-like protein TIGR03299
no
0.30
19
RR42
_RS08905
XRE family transcriptional regulator
no
0.30
20
RR42
_RS25830
cytochrome BD ubiquinol oxidase subunit II
0.80
0.29
Or look for
negative cofitness