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  • Top cofit genes for RR42_RS17675 from Cupriavidus basilensis FW507-4G11

    UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
    SEED: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)
    KEGG: UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS14015 beta-hexosaminidase 0.88 0.74
    2 RR42_RS02765 aminoglycoside phosphotransferase 0.89 0.63
    3 RR42_RS17865 N-acetyl-anhydromuranmyl-L-alanine amidase 0.93 0.58
    4 RR42_RS01185 muropeptide transporter 0.84 0.55
    5 RR42_RS35375 RND transporter no 0.53
    6 RR42_RS11180 peptidylprolyl isomerase 0.84 0.53
    7 RR42_RS35380 hypothetical protein no 0.52
    8 RR42_RS35370 copper oxidase no 0.50
    9 RR42_RS30960 transcriptional regulator 0.67 0.49
    10 RR42_RS18840 2-alkenal reductase 0.40 0.49
    11 RR42_RS07885 chemotaxis protein CheY 0.69 0.49
    12 RR42_RS02750 mannose-1-phosphate guanylyltransferase 0.93 0.48
    13 RR42_RS01830 sulfurtransferase 0.84 0.48
    14 RR42_RS15790 aminotransferase class III no 0.47
    15 RR42_RS15475 protein tolQ 0.69 0.47
    16 RR42_RS27945 RNA chaperone Hfq no 0.46
    17 RR42_RS32235 hopanoid biosynthesis associated radical SAM protein HpnH 0.83 0.46
    18 RR42_RS02810 acyl-phosphate glycerol 3-phosphate acyltransferase 0.44 0.46
    19 RR42_RS15785 glycosyl transferase family 28 no 0.46
    20 RR42_RS04430 phosphoglycolate phosphatase 0.92 0.46

    Or look for negative cofitness