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Cofit
Protein
Homologs
Top cofit genes for RR42_RS17380 from
Cupriavidus basilensis FW507-4G11
catalase
SEED: Catalase (EC 1.11.1.6)
KEGG: catalase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS13435
polyphosphate kinase
0.76
0.92
2
RR42
_RS07325
exodeoxyribonuclease III
0.74
0.82
3
RR42
_RS01220
exodeoxyribonuclease III
0.14
0.75
4
RR42
_RS15050
DNA polymerase I
0.52
0.69
5
RR42
_RS07480
ADP-ribose pyrophosphatase
0.37
0.66
6
RR42
_RS04375
magnesium transporter
0.68
0.66
7
RR42
_RS27055
membrane protein
no
0.66
8
RR42
_RS17375
hypothetical protein
no
0.64
9
RR42
_RS05970
endonuclease III
0.56
0.63
10
RR42
_RS02785
dimethyladenosine transferase
0.36
0.63
11
RR42
_RS34320
IclR family transcriptional regulator
no
0.62
12
RR42
_RS10980
hydroxypyruvate isomerase
0.52
0.61
13
RR42
_RS19420
hypothetical protein
no
0.60
14
RR42
_RS17610
malate dehydrogenase
0.31
0.59
15
RR42
_RS03840
molybdate ABC transporter substrate-binding protein
0.47
0.59
16
RR42
_RS33510
permease
no
0.58
17
RR42
_RS19825
LysR family transcriptional regulator
no
0.57
18
RR42
_RS05330
xanthine dehydrogenase
no
0.57
19
RR42
_RS05255
allantoinase
no
0.56
20
RR42
_RS05340
FAD-binding molybdopterin dehydrogenase
0.72
0.56
Or look for
negative cofitness