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  • Top cofit genes for RR42_RS17290 from Cupriavidus basilensis FW507-4G11

    LysR family transcriptional regulator
    SEED: Glycine cleavage system transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS17300 D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) (from data) 0.52 0.52
    2 RR42_RS17310 D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) (from data) 0.52 0.48
    3 RR42_RS03060 MFS transporter no 0.47
    4 RR42_RS17305 ion transporter no 0.45
    5 RR42_RS17315 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) (from data) 0.50 0.41
    6 RR42_RS01240 membrane protein no 0.36
    7 RR42_RS23360 flagellar biosynthesis protein flip no 0.32
    8 RR42_RS29230 TetR family transcriptional regulator no 0.31
    9 RR42_RS02595 glutamine amidotransferase no 0.29
    10 RR42_RS09970 hypothetical protein no 0.28
    11 RR42_RS13875 sodium:solute symporter no 0.27
    12 RR42_RS29075 LysR family transcriptional regulator no 0.27
    13 RR42_RS01055 ABC transporter substrate-binding protein no 0.27
    14 RR42_RS16000 hypothetical protein no 0.27
    15 RR42_RS11795 PEP synthetase regulatory protein 0.56 0.26
    16 RR42_RS04615 sorbosone dehydrogenase no 0.26
    17 RR42_RS34760 cytochrome D ubiquinol oxidase subunit I no 0.26
    18 RR42_RS08715 LysR family transcriptional regulator no 0.26
    19 RR42_RS03075 transcriptional regulator no 0.26
    20 RR42_RS10145 hypothetical protein no 0.26

    Or look for negative cofitness