Top cofit genes for RR42_RS16970 from Cupriavidus basilensis FW507-4G11

ABC transporter ATP-binding protein
SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS16980		branched-chain amino acid ABC transporter substrate-binding protein	0.99	0.97
2	RR42_RS16960		ABC transporter ATP-binding protein	0.99	0.97
3	RR42_RS16975		ABC transporter permease	1.00	0.96
4	RR42_RS16965		ABC transporter	0.99	0.95
5	RR42_RS11885		(protein-PII) uridylyltransferase	0.80	0.72
6	RR42_RS12980		chemotaxis protein CheY	0.46	0.69
7	RR42_RS12985		histidine kinase	0.82	0.67
8	RR42_RS01955		nitrate transporter	0.35	0.58
9	RR42_RS15905		phosphoenolpyruvate carboxylase	no	0.57
10	RR42_RS26895		3-methylcrotonyl-CoA carboxylase	0.48	0.56
11	RR42_RS26915		AMP-binding protein	0.55	0.56
12	RR42_RS26905		methylcrotonoyl-CoA carboxylase	0.76	0.54
13	RR42_RS00725		hypothetical protein	no	0.54
14	RR42_RS00955		hydroxymethylglutaryl-CoA lyase	0.46	0.53
15	RR42_RS02085		RNA polymerase subunit sigma-54	0.44	0.52
16	RR42_RS12040		MFS transporter	0.40	0.51
17	RR42_RS34245		branched-chain alpha-ketoacid:ferredoxin oxidoreductase, fused (from data)	0.49	0.49
18	RR42_RS11790		phosphoenolpyruvate synthase	0.83	0.49
19	RR42_RS34250		LysR family transcriptional regulator	0.44	0.48
20	RR42_RS05980		TetR family transcriptional regulator	0.53	0.48

Or look for negative cofitness