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Cofit
Protein
Homologs
Top cofit genes for RR42_RS16460 from
Cupriavidus basilensis FW507-4G11
cupin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS00310
TetR family transcriptional regulator
no
0.45
2
RR42
_RS30310
signal transduction protein
no
0.34
3
RR42
_RS08555
major tail tube protein
no
0.31
4
RR42
_RS10855
diguanylate phosphodiesterase
no
0.31
5
RR42
_RS03370
fructose ABC transporter, substrate-binding component (FrcB)
(from data)
no
0.31
6
RR42
_RS32815
hypothetical protein
no
0.31
7
RR42
_RS08220
hypothetical protein
no
0.30
8
RR42
_RS34065
quinone oxidoreductase
no
0.30
9
RR42
_RS35360
copper resistance protein CopC
no
0.30
10
RR42
_RS08245
hypothetical protein
no
0.29
11
RR42
_RS01315
GNAT family acetyltransferase
no
0.29
12
RR42
_RS30220
porin
no
0.29
13
RR42
_RS10370
ABC transporter
no
0.29
14
RR42
_RS04890
ribonuclease PH
no
0.29
15
RR42
_RS10020
4-methylmuconolactone methylisomerase
no
0.29
16
RR42
_RS35810
flagellar motor protein MotB
no
0.28
17
RR42
_RS04685
lipoprotein
no
0.28
18
RR42
_RS17910
AraC family transcriptional regulator
no
0.28
19
RR42
_RS04350
ABC transporter ATP-binding protein
no
0.28
20
RR42
_RS04805
pirin
no
0.28
Or look for
negative cofitness