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Cofit
Protein
Homologs
Top cofit genes for RR42_RS16275 from
Cupriavidus basilensis FW507-4G11
membrane protein
SEED: Putative sulfate permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS16255
sulfate adenylyltransferase
0.94
0.89
2
RR42
_RS16250
sulfate adenylyltransferase
0.95
0.89
3
RR42
_RS16270
sulfite reductase
0.88
0.88
4
RR42
_RS01160
homoserine O-acetyltransferase
0.89
0.88
5
RR42
_RS16245
uroporphyrin-III methyltransferase
0.84
0.86
6
RR42
_RS16265
required for sulfate utilization, putative electron transport protein for sulfite reductase
(from data)
0.89
0.85
7
RR42
_RS16280
transcriptional regulator
0.91
0.84
8
RR42
_RS04475
3-phosphoshikimate 1-carboxyvinyltransferase
0.67
0.84
9
RR42
_RS06485
chorismate synthase
0.88
0.82
10
RR42
_RS30655
LysR family transcriptional regulator
0.79
0.80
11
RR42
_RS01385
5,10-methylenetetrahydrofolate reductase
0.75
0.80
12
RR42
_RS30660
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
0.81
0.80
13
RR42
_RS14320
O-succinylhomoserine sulfhydrylase
0.86
0.79
14
RR42
_RS17645
shikimate dehydrogenase
0.74
0.78
15
RR42
_RS01290
thiamine biosynthesis protein ThiC
0.71
0.78
16
RR42
_RS16240
cobalamin biosynthesis protein CbiX
0.68
0.78
17
RR42
_RS14400
isopropylmalate isomerase
0.81
0.78
18
RR42
_RS01380
membrane protein
no
0.78
19
RR42
_RS14385
3-isopropylmalate dehydrogenase
0.81
0.76
20
RR42
_RS04460
chorismate mutase
0.90
0.76
Or look for
negative cofitness