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Cofit
Protein
Homologs
Top cofit genes for RR42_RS15795 from
Cupriavidus basilensis FW507-4G11
spore coat protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS15790
aminotransferase class III
no
0.89
2
RR42
_RS15800
aldo/keto reductase
0.41
0.84
3
RR42
_RS15775
N-acetylneuraminate synthase
0.98
0.78
4
RR42
_RS15770
hypothetical protein
no
0.77
5
RR42
_RS15710
LPS biosynthesis protein
no
0.70
6
RR42
_RS15785
glycosyl transferase family 28
0.71
0.68
7
RR42
_RS15745
group1 glycosyl transferase
no
0.59
8
RR42
_RS15735
pyridoxal phosphate-dependent aminotransferase
no
0.59
9
RR42
_RS15730
sugar transferase
no
0.58
10
RR42
_RS15740
hypothetical protein
no
0.58
11
RR42
_RS15705
glycosyl transferase family 1
no
0.57
12
RR42
_RS17865
N-acetyl-anhydromuranmyl-L-alanine amidase
no
0.56
13
RR42
_RS17885
ABC transporter permease
no
0.55
14
RR42
_RS14080
RNA polymerase sigma factor RpoE
no
0.53
15
RR42
_RS32235
hopanoid biosynthesis associated radical SAM protein HpnH
no
0.53
16
RR42
_RS36045
hypothetical protein
no
0.52
17
RR42
_RS18270
murein transglycosylase
no
0.52
18
RR42
_RS01270
3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase
no
0.52
19
RR42
_RS02765
aminoglycoside phosphotransferase
no
0.51
20
RR42
_RS18840
2-alkenal reductase
no
0.51
Or look for
negative cofitness