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Cofit
Protein
Homologs
Top cofit genes for RR42_RS15415 from
Cupriavidus basilensis FW507-4G11
membrane protein
SEED: Probable transmembrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS15410
membrane protein
0.78
0.83
2
RR42
_RS15420
hypothetical protein
0.76
0.59
3
RR42
_RS14790
cobalamin biosynthesis protein CobD
0.65
0.53
4
RR42
_RS15890
heme biosynthesis protein HemY
0.69
0.51
5
RR42
_RS18300
anthranilate synthase subunit II
0.27
0.48
6
RR42
_RS15895
uroporphyrinogen III methyltransferase
0.62
0.48
7
RR42
_RS02085
RNA polymerase subunit sigma-54
no
0.46
8
RR42
_RS17105
Clp protease ClpX
0.33
0.46
9
RR42
_RS15405
peroxidase
0.26
0.46
10
RR42
_RS33195
UDP-sugar lipid carrier transferase
no
0.45
11
RR42
_RS33355
membrane protein
no
0.44
12
RR42
_RS08365
hypothetical protein
no
0.44
13
RR42
_RS15905
phosphoenolpyruvate carboxylase
no
0.43
14
RR42
_RS11885
(protein-PII) uridylyltransferase
no
0.42
15
RR42
_RS14365
N-(5'-phosphoribosyl)anthranilate isomerase
no
0.40
16
RR42
_RS17055
LuxR family transcriptional regulator
no
0.40
17
RR42
_RS18985
glutamate synthase
0.42
0.40
18
RR42
_RS18295
anthranilate synthase component I
0.45
0.40
19
RR42
_RS05860
phospho-2-dehydro-3-deoxyheptonate aldolase
0.47
0.39
20
RR42
_RS02375
membrane protein
no
0.39
Or look for
negative cofitness