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Cofit
Protein
Homologs
Top cofit genes for RR42_RS15410 from
Cupriavidus basilensis FW507-4G11
membrane protein
SEED: Probable transmembrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS15415
membrane protein
0.78
0.83
2
RR42
_RS15420
hypothetical protein
0.68
0.70
3
RR42
_RS15890
heme biosynthesis protein HemY
0.72
0.61
4
RR42
_RS14790
cobalamin biosynthesis protein CobD
0.76
0.59
5
RR42
_RS15895
uroporphyrinogen III methyltransferase
0.65
0.56
6
RR42
_RS15405
peroxidase
no
0.55
7
RR42
_RS15905
phosphoenolpyruvate carboxylase
no
0.53
8
RR42
_RS18300
anthranilate synthase subunit II
0.30
0.51
9
RR42
_RS08365
hypothetical protein
no
0.51
10
RR42
_RS17105
Clp protease ClpX
0.50
0.48
11
RR42
_RS02045
GTPase
no
0.48
12
RR42
_RS04895
serine/threonine protein phosphatase
no
0.46
13
RR42
_RS05860
phospho-2-dehydro-3-deoxyheptonate aldolase
no
0.46
14
RR42
_RS11885
(protein-PII) uridylyltransferase
0.29
0.46
15
RR42
_RS17055
LuxR family transcriptional regulator
no
0.46
16
RR42
_RS17060
histidine kinase
no
0.46
17
RR42
_RS33195
UDP-sugar lipid carrier transferase
no
0.44
18
RR42
_RS33355
membrane protein
no
0.43
19
RR42
_RS12980
chemotaxis protein CheY
0.23
0.43
20
RR42
_RS12985
histidine kinase
0.23
0.42
Or look for
negative cofitness