Top cofit genes for RR42_RS15215 from Cupriavidus basilensis FW507-4G11

carnitine dehydratase
SEED: CAIB/BAIF family protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS08640		phage capsid protein	no	0.45
2	RR42_RS09920		TetR family transcriptional regulator	no	0.43
3	RR42_RS06480		glutathione S-transferase	no	0.38
4	RR42_RS07930		peptide ABC transporter ATP-binding protein	no	0.38
5	RR42_RS08440		ATP synthase I	no	0.37
6	RR42_RS33415		RND transporter MFP subunit	no	0.37
7	RR42_RS09610		mRNA 3'-end processing factor	no	0.37
8	RR42_RS21595		IclR family transcriptional regulator	no	0.37
9	RR42_RS17010		L-aspartate oxidase	no	0.36
10	RR42_RS26675		methyltransferase	no	0.36
11	RR42_RS10015		4-methylmuconolactone transporter	no	0.36
12	RR42_RS17020		quinolinate synthetase	no	0.35
13	RR42_RS00410		transcriptional regulator	no	0.35
14	RR42_RS19455		NAD(P)H dehydrogenase	no	0.34
15	RR42_RS22980		hypothetical protein	no	0.34
16	RR42_RS34815		diguanylate cyclase	no	0.34
17	RR42_RS11615		GTP-binding protein	no	0.34
18	RR42_RS01290		thiamine biosynthesis protein ThiC	no	0.34
19	RR42_RS24045		gentisate 1,2-dioxygenase	no	0.34
20	RR42_RS07330		histidine utilization repressor	0.50	0.34

Or look for negative cofitness