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  • Top cofit genes for RR42_RS15155 from Cupriavidus basilensis FW507-4G11

    CoA-transferase
    SEED: L-carnitine dehydratase/bile acid-inducible protein F
    KEGG: formyl-CoA transferase

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS22490 IclR family transcriptional regulator no 0.79
    2 RR42_RS21255 LysR family transcriptional regulator no 0.79
    3 RR42_RS22495 hypothetical protein no 0.78
    4 RR42_RS29865 hypothetical protein no 0.77
    5 RR42_RS29970 IclR family transcriptional regulator no 0.76
    6 RR42_RS35920 3-oxoadipate CoA-transferase 0.33 0.76
    7 RR42_RS21260 isovaleryl-CoA dehydrogenase 0.19 0.76
    8 RR42_RS36125 IclR family transcriptional regulator 0.23 0.75
    9 RR42_RS36595 acyl-CoA dehydrogenase no 0.75
    10 RR42_RS29410 acetyl-CoA carboxylase no 0.71
    11 RR42_RS26840 DNA-binding protein 0.23 0.70
    12 RR42_RS35910 short-chain dehydrogenase no 0.67
    13 RR42_RS36635 long-chain fatty acid--CoA ligase no 0.65
    14 RR42_RS36645 acyl-CoA dehydrogenase no 0.64
    15 RR42_RS37010 cyclase no 0.64
    16 RR42_RS35930 DNA repair exonuclease no 0.62
    17 RR42_RS24350 malyl-CoA thiolesterase no 0.61
    18 RR42_RS11095 3-hydroxyacyl-CoA dehydrogenase 0.73 0.61
    19 RR42_RS24355 hypothetical protein no 0.60
    20 RR42_RS35940 ABC transporter substrate-binding protein no 0.60

    Or look for negative cofitness