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Cofit
Protein
Homologs
Top cofit genes for RR42_RS15135 from
Cupriavidus basilensis FW507-4G11
LysR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS31300
TetR family transcriptional regulator
no
0.39
2
RR42
_RS28385
ABC transporter substrate-binding protein
no
0.38
3
RR42
_RS29305
short-chain dehydrogenase
0.32
0.38
4
RR42
_RS29085
glucarate transporter
no
0.37
5
RR42
_RS04850
hypothetical protein
no
0.37
6
RR42
_RS25660
cytochrome C biogenesis protein
no
0.36
7
RR42
_RS05125
malonic semialdehyde reductase
no
0.36
8
RR42
_RS25195
AMP-dependent synthetase
no
0.36
9
RR42
_RS30665
TonB-dependent receptor
no
0.36
10
RR42
_RS00775
methionine synthase
no
0.35
11
RR42
_RS27315
ferredoxin
no
0.34
12
RR42
_RS27690
RND transporter
no
0.34
13
RR42
_RS17380
catalase
no
0.34
14
RR42
_RS10980
hydroxypyruvate isomerase
0.26
0.33
15
RR42
_RS31890
acetyl-CoA acetyltransferase
no
0.33
16
RR42
_RS28700
mechanosensitive ion channel protein MscS
no
0.33
17
RR42
_RS02655
LysR family transcriptional regulator
no
0.33
18
RR42
_RS11485
dehydrogenase
no
0.33
19
RR42
_RS33315
ABC transporter substrate-binding protein
no
0.33
20
RR42
_RS32460
LysR family transcriptional regulator
no
0.33
Or look for
negative cofitness