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Cofit
Protein
Homologs
Top cofit genes for RR42_RS15035 from
Cupriavidus basilensis FW507-4G11
ZIP zinc transporter
SEED: Zinc transporter, ZIP family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS17930
RNA pyrophosphohydrolase
no
0.48
2
RR42
_RS05995
excinuclease ABC subunit B
0.75
0.47
3
RR42
_RS16280
transcriptional regulator
no
0.43
4
RR42
_RS12925
ATPase
0.73
0.43
5
RR42
_RS23515
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
no
0.43
6
RR42
_RS04470
prephenate dehydrogenase
no
0.43
7
RR42
_RS09335
DNA polymerase II
no
0.43
8
RR42
_RS04475
3-phosphoshikimate 1-carboxyvinyltransferase
no
0.42
9
RR42
_RS06485
chorismate synthase
no
0.42
10
RR42
_RS30640
DNA mismatch repair protein MutT
0.55
0.41
11
RR42
_RS02145
excinuclease ABC subunit A
0.54
0.41
12
RR42
_RS20510
small component of pyruvate transporter (ybdD-like)
(from data)
no
0.41
13
RR42
_RS28885
membrane protein
no
0.40
14
RR42
_RS14000
excinuclease ABC subunit C
no
0.40
15
RR42
_RS06630
integration host factor subunit alpha
no
0.40
16
RR42
_RS30655
LysR family transcriptional regulator
no
0.39
17
RR42
_RS22900
5-oxoprolinase
no
0.39
18
RR42
_RS19310
ATP-dependent DNA helicase RecQ
0.25
0.38
19
RR42
_RS17645
shikimate dehydrogenase
no
0.38
20
RR42
_RS22895
5-oxoprolinase
no
0.38
Or look for
negative cofitness