Top cofit genes for RR42_RS14415 from Cupriavidus basilensis FW507-4G11

leucine/isoleucine/valine transporter permease subunit
SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS14425		leucine ABC transporter substrate-binding protein	0.98	0.83
2	RR42_RS14420		branched-chain amino acid transporter permease subunit LivH	1.00	0.81
3	RR42_RS14410		leucine/isoleucine/valine transporter ATP-binding subunit	0.99	0.62
4	RR42_RS14405		leucine/isoleucine/valine transporter ATP-binding subunit	0.99	0.59
5	RR42_RS33495		L-phenylalanine:H+ symporter AroP (from data)	0.66	0.43
6	RR42_RS07455		ABC transporter substrate-binding protein	no	0.42
7	RR42_RS07450		ABC transporter permease	0.34	0.40
8	RR42_RS02355		ATPase	no	0.39
9	RR42_RS30400		serine--glyoxylate aminotransferase	no	0.38
10	RR42_RS07920		cyclophilin-like superfamily protein	no	0.36
11	RR42_RS30405		GntR family transcriptional regulator	no	0.35
12	RR42_RS33505		AsnC family transcriptional regulator	no	0.34
13	RR42_RS08875		Rrf2 family transcriptional regulator	no	0.34
14	RR42_RS10015		4-methylmuconolactone transporter	no	0.33
15	RR42_RS08640		phage capsid protein	no	0.33
16	RR42_RS21075		phosphoribosyltransferase	no	0.33
17	RR42_RS11465		pyrroloquinoline quinone biosynthesis protein PqqC	no	0.33
18	RR42_RS09310		IclR family transcriptional regulator	no	0.32
19	RR42_RS12065		acyl-CoA-binding protein	no	0.31
20	RR42_RS29630		hypothetical protein	no	0.31

Or look for negative cofitness