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Cofit
Protein
Homologs
Top cofit genes for RR42_RS13835 from
Cupriavidus basilensis FW507-4G11
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS12135
hypothetical protein
no
0.33
2
RR42
_RS26930
membrane protein
no
0.32
3
RR42
_RS12705
transcriptional regulator
no
0.32
4
RR42
_RS04380
LysR family transcriptional regulator
no
0.31
5
RR42
_RS16640
LysR family transcriptional regulator
no
0.31
6
RR42
_RS32395
IclR family transcriptional regulator
no
0.30
7
RR42
_RS20880
hypothetical protein
no
0.30
8
RR42
_RS21785
MFS transporter
no
0.29
9
RR42
_RS25120
IclR family transcriptional regulator
no
0.29
10
RR42
_RS00215
branched-chain amino acid ABC transporter ATP-binding protein
no
0.29
11
RR42
_RS36840
hydrolase
no
0.29
12
RR42
_RS21420
acyl-CoA dehydrogenase
no
0.29
13
RR42
_RS19475
general secretion pathway protein
no
0.29
14
RR42
_RS09610
mRNA 3'-end processing factor
no
0.29
15
RR42
_RS07110
hypothetical protein
no
0.29
16
RR42
_RS02795
multidrug DMT transporter permease
no
0.28
17
RR42
_RS21405
LysR family transcriptional regulator
no
0.28
18
RR42
_RS18450
hypothetical protein
no
0.28
19
RR42
_RS03875
nucleoside 2-deoxyribosyltransferase
no
0.28
20
RR42
_RS10585
TetR family transcriptional regulator
no
0.28
Or look for
negative cofitness