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Cofit
Protein
Homologs
Top cofit genes for RR42_RS13730 from
Cupriavidus basilensis FW507-4G11
TetR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS36830
antibiotic biosynthesis monooxygenase
no
0.38
2
RR42
_RS11080
phenylacetic acid degradation protein
no
0.37
3
RR42
_RS23445
LacI family transcriptional regulator
no
0.35
4
RR42
_RS12470
long-chain fatty acid--CoA ligase
no
0.35
5
RR42
_RS19035
pilus assembly protein PilM
no
0.35
6
RR42
_RS05460
peptidase M23
no
0.34
7
RR42
_RS11120
DNA-binding protein
no
0.33
8
RR42
_RS33120
histone acetyltransferase
no
0.32
9
RR42
_RS28400
CoA-transferase
no
0.32
10
RR42
_RS26875
LysR family transcriptional regulator
no
0.32
11
RR42
_RS23440
hypothetical protein
no
0.32
12
RR42
_RS26555
tRNA-Met
no
0.31
13
RR42
_RS37510
hypothetical protein
no
0.31
14
RR42
_RS15205
pyridoxamine 5'-phosphate oxidase
no
0.31
15
RR42
_RS31565
50S ribosomal protein L21
no
0.31
16
RR42
_RS35680
flagellar hook protein FlgK
no
0.31
17
RR42
_RS36400
hypothetical protein
no
0.31
18
RR42
_RS26080
hypothetical protein
no
0.31
19
RR42
_RS07980
MFS transporter
no
0.30
20
RR42
_RS25510
short-chain dehydrogenase
no
0.30
Or look for
negative cofitness