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Cofit
Protein
Homologs
Top cofit genes for RR42_RS13130 from
Cupriavidus basilensis FW507-4G11
membrane protein
SEED: Mlr7403 protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS09045
peptidylprolyl isomerase
0.98
0.61
2
RR42
_RS11840
zinc metalloprotease
0.87
0.39
3
RR42
_RS02405
membrane protein
0.43
0.37
4
RR42
_RS35375
RND transporter
no
0.36
5
RR42
_RS35380
hypothetical protein
no
0.36
6
RR42
_RS35385
hypothetical protein
no
0.35
7
RR42
_RS08225
chromosome partitioning protein ParB
no
0.33
8
RR42
_RS04195
membrane protein
no
0.33
9
RR42
_RS13165
membrane protein
0.51
0.33
10
RR42
_RS04430
phosphoglycolate phosphatase
no
0.33
11
RR42
_RS35370
copper oxidase
no
0.33
12
RR42
_RS17675
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
0.69
0.32
13
RR42
_RS05430
DNA-directed RNA polymerase sigma-70 factor
0.53
0.32
14
RR42
_RS11180
peptidylprolyl isomerase
0.68
0.32
15
RR42
_RS19740
16S rRNA methyltransferase
0.33
0.31
16
RR42
_RS02810
acyl-phosphate glycerol 3-phosphate acyltransferase
no
0.31
17
RR42
_RS03115
ligase
no
0.30
18
RR42
_RS15700
UDP-galactose-lipid carrier transferase
no
0.30
19
RR42
_RS26935
farnesyl-diphosphate farnesyltransferase
no
0.29
20
RR42
_RS01405
lytic transglycosylase
no
0.29
Or look for
negative cofitness