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Cofit
Protein
Homologs
Top cofit genes for RR42_RS13025 from
Cupriavidus basilensis FW507-4G11
hypothetical protein
SEED: Surface antigen
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS13015
fatty acid hydroxylase
0.92
0.69
2
RR42
_RS19515
general secretion pathway protein GspN
no
0.49
3
RR42
_RS19530
general secretion pathway protein GspF
no
0.49
4
RR42
_RS19500
general secretion pathway protein GspK
no
0.48
5
RR42
_RS19505
general secretion pathway protein GspL
no
0.46
6
RR42
_RS19510
general secretion pathway protein GspM
no
0.45
7
RR42
_RS19520
general secretion pathway protein GspD
no
0.45
8
RR42
_RS18825
ubiquinol-cytochrome C reductase
no
0.45
9
RR42
_RS12990
hypothetical protein
no
0.44
10
RR42
_RS01680
cytochrome C550
0.42
0.44
11
RR42
_RS00610
hypothetical protein
0.58
0.44
12
RR42
_RS19495
general secretion pathway protein GspJ
0.44
0.44
13
RR42
_RS35850
hypothetical protein
no
0.43
14
RR42
_RS17920
lytic transglycosylase
no
0.43
15
RR42
_RS19525
general secretion pathway protein GspE
no
0.42
16
RR42
_RS30390
lactate dehydrogenase
no
0.41
17
RR42
_RS19475
general secretion pathway protein
no
0.41
18
RR42
_RS10955
GntR family transcriptional regulator
0.44
0.40
19
RR42
_RS05315
fatty acid desaturase
no
0.40
20
RR42
_RS10910
aminodeoxychorismate lyase
no
0.39
Or look for
negative cofitness