Top cofit genes for RR42_RS12495 from Cupriavidus basilensis FW507-4G11

ABC transporter permease
SEED: Benzoate transport, extracellular ligand-binding receptor
KEGG: branched-chain amino acid transport system substrate-binding protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS17055		LuxR family transcriptional regulator	no	0.42
2	RR42_RS00045		lactate dehydrogenase	no	0.41
3	RR42_RS09920		TetR family transcriptional regulator	no	0.40
4	RR42_RS35645		MFS transporter	no	0.40
5	RR42_RS35630		ArsR family transcriptional regulator	no	0.39
6	RR42_RS17060		histidine kinase	no	0.39
7	RR42_RS35445		ArsR family transcriptional regulator	no	0.39
8	RR42_RS28885		membrane protein	0.25	0.38
9	RR42_RS22890		TetR family transcriptional regulator	no	0.38
10	RR42_RS05630		branched-chain amino acid ABC transporter substrate-binding protein	no	0.38
11	RR42_RS22760		GntR family transcriptional regulator	no	0.37
12	RR42_RS17510		chemotaxis protein CheY	no	0.37
13	RR42_RS35635		hypothetical protein	no	0.37
14	RR42_RS22895		5-oxoprolinase	no	0.37
15	RR42_RS12925		ATPase	0.41	0.37
16	RR42_RS30640		DNA mismatch repair protein MutT	no	0.37
17	RR42_RS17985		type II secretion system protein F	no	0.36
18	RR42_RS32560		membrane protein	no	0.36
19	RR42_RS00250		GntR family transcriptional regulator	no	0.36
20	RR42_RS33180		hypothetical protein	no	0.35

Or look for negative cofitness