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Cofit
Protein
Homologs
Top cofit genes for RR42_RS12440 from
Cupriavidus basilensis FW507-4G11
cytochrome C
SEED: Cytochrome c family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS35980
membrane protein
0.40
0.41
2
RR42
_RS24120
C4-dicarboxylate ABC transporter substrate-binding protein
no
0.40
3
RR42
_RS18785
hypothetical protein
no
0.39
4
RR42
_RS18975
ABC transporter substrate-binding protein
no
0.38
5
RR42
_RS33400
hypothetical protein
no
0.38
6
RR42
_RS13845
hypothetical protein
0.31
0.37
7
RR42
_RS35100
TetR family transcriptional regulator
no
0.37
8
RR42
_RS13645
MFS transporter
0.15
0.36
9
RR42
_RS10005
3-oxoadipate CoA-transferase
no
0.36
10
RR42
_RS36100
surface antigen
no
0.36
11
RR42
_RS18790
hypothetical protein
no
0.36
12
RR42
_RS09550
universal stress protein UspA
no
0.35
13
RR42
_RS04640
DNA mismatch repair protein MutT
no
0.35
14
RR42
_RS19280
transcriptional regulator
0.48
0.34
15
RR42
_RS15595
acetoacetyl-CoA synthetase
no
0.34
16
RR42
_RS20330
LysR family transcriptional regulator
no
0.34
17
RR42
_RS22220
cytochrome o ubiquinol oxidase subunit III
no
0.34
18
RR42
_RS01450
hypothetical protein
no
0.34
19
RR42
_RS24155
monooxygenase
no
0.34
20
RR42
_RS11205
FAD-dependent oxidoreductase
no
0.34
Or look for
negative cofitness