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Cofit
Protein
Homologs
Top cofit genes for RR42_RS12310 from
Cupriavidus basilensis FW507-4G11
alkyl hydroperoxide reductase
SEED: Peroxiredoxin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS05745
aminoglycoside phosphotransferase
no
0.41
2
RR42
_RS31145
RNA polymerase sigma factor
no
0.38
3
RR42
_RS03850
hypothetical protein
no
0.38
4
RR42
_RS27200
LacI family transcriptional regulator
no
0.38
5
RR42
_RS32685
phenol hydroxylase
no
0.36
6
RR42
_RS02350
VWA domain-containing protein
no
0.35
7
RR42
_RS10965
membrane protein
no
0.35
8
RR42
_RS17035
hypothetical protein
no
0.35
9
RR42
_RS18445
hypothetical protein
no
0.35
10
RR42
_RS23500
benzene 1,2-dioxygenase
no
0.34
11
RR42
_RS23505
catechol 1,2-dioxygenase
no
0.34
12
RR42
_RS07140
hypothetical protein
no
0.33
13
RR42
_RS03845
2', 3'-cyclic nucleotide 2'-phosphodiesterase
no
0.32
14
RR42
_RS21635
alpha/beta hydrolase
no
0.32
15
RR42
_RS33460
glutathione S-transferase
no
0.32
16
RR42
_RS08675
hypothetical protein
no
0.31
17
RR42
_RS06150
peptidase
no
0.31
18
RR42
_RS10480
hypothetical protein
no
0.31
19
RR42
_RS11245
antibiotic biosynthesis monooxygenase
no
0.30
20
RR42
_RS09730
membrane protein
no
0.30
Or look for
negative cofitness