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Cofit
Protein
Homologs
Top cofit genes for RR42_RS12300 from
Cupriavidus basilensis FW507-4G11
cupin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS01905
cytochrome C oxidase subunit II
no
0.47
2
RR42
_RS29765
flavin reductase
no
0.46
3
RR42
_RS03385
sugar kinase
no
0.45
4
RR42
_RS18815
cytochrome C
no
0.44
5
RR42
_RS02485
short-chain dehydrogenase
no
0.43
6
RR42
_RS21595
IclR family transcriptional regulator
no
0.43
7
RR42
_RS02580
amino acid ABC transporter permease
no
0.42
8
RR42
_RS31440
ABC transporter substrate-binding protein
no
0.41
9
RR42
_RS34905
enoyl-CoA hydratase
no
0.41
10
RR42
_RS18820
cytochrome B
no
0.41
11
RR42
_RS28535
transcriptional regulator
no
0.40
12
RR42
_RS34940
bb3-type cytochrome oxidase subunit IV
no
0.40
13
RR42
_RS30685
hypothetical protein
no
0.40
14
RR42
_RS28610
acyl-CoA dehydrogenase
no
0.40
15
RR42
_RS34530
hypothetical protein
no
0.40
16
RR42
_RS28760
membrane protein
no
0.39
17
RR42
_RS30930
4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
no
0.39
18
RR42
_RS32465
3-phenylpropionic acid transporter
no
0.39
19
RR42
_RS09970
hypothetical protein
no
0.39
20
RR42
_RS24605
TetR family transcriptional regulator
no
0.39
Or look for
negative cofitness