Top cofit genes for RR42_RS12245 from Cupriavidus basilensis FW507-4G11

transcriptional regulator
SEED: Alkanesulfonate utilization operon LysR-family regulator CbI
KEGG: LysR family transcriptional regulator, cys regulon transcriptional activator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS13940		hypothetical protein	no	0.38
2	RR42_RS23240		2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase	no	0.38
3	RR42_RS16975		ABC transporter permease	no	0.34
4	RR42_RS29605		hypothetical protein	no	0.34
5	RR42_RS07835		membrane protein	0.36	0.34
6	RR42_RS16960		ABC transporter ATP-binding protein	no	0.33
7	RR42_RS05045		hypothetical protein	no	0.33
8	RR42_RS28615		ABC transporter substrate-binding protein	no	0.33
9	RR42_RS31550		RND transporter	no	0.33
10	RR42_RS16980		branched-chain amino acid ABC transporter substrate-binding protein	0.41	0.33
11	RR42_RS27165		hypothetical protein	no	0.32
12	RR42_RS12255		sulfate/thiosulfate transporter permease subunit	0.97	0.32
13	RR42_RS34250		LysR family transcriptional regulator	no	0.32
14	RR42_RS10580		NADPH:quinone oxidoreductase	no	0.31
15	RR42_RS05130		2-aminomuconate deaminase	no	0.31
16	RR42_RS21695		DNA-binding protein	no	0.31
17	RR42_RS29585		aspartate racemase	no	0.30
18	RR42_RS04030		hypothetical protein	no	0.30
19	RR42_RS10845		cupin	no	0.29
20	RR42_RS16965		ABC transporter	no	0.29

Or look for negative cofitness