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Cofit
Protein
Homologs
Top cofit genes for RR42_RS11715 from
Cupriavidus basilensis FW507-4G11
DNA-binding protein
SEED: putative DNA-binding protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS02115
arylsulfate sulfotransferase
no
0.39
2
RR42
_RS00410
transcriptional regulator
no
0.36
3
RR42
_RS33505
AsnC family transcriptional regulator
no
0.36
4
RR42
_RS33510
permease
no
0.35
5
RR42
_RS29480
AraC family transcriptional regulator
no
0.34
6
RR42
_RS30695
ABC transporter substrate-binding protein
no
0.34
7
RR42
_RS30185
TetR family transcriptional regulator
no
0.34
8
RR42
_RS11445
Fis family transcriptional regulator
no
0.34
9
RR42
_RS07990
integrase
no
0.33
10
RR42
_RS27625
TetR family transcriptional regulator
no
0.33
11
RR42
_RS16565
hypothetical protein
no
0.33
12
RR42
_RS18010
7,8-dihydro-8-oxoguanine-triphosphatase
0.28
0.33
13
RR42
_RS31380
succinate--CoA ligase
no
0.33
14
RR42
_RS12465
cytochrome C1
no
0.32
15
RR42
_RS01470
hypothetical protein
no
0.32
16
RR42
_RS26685
ferredoxin-NADP reductase
no
0.32
17
RR42
_RS36250
hypothetical protein
no
0.31
18
RR42
_RS29910
LacI family transcriptional regulator
no
0.30
19
RR42
_RS04095
pilus assembly protein TadB
no
0.30
20
RR42
_RS05340
FAD-binding molybdopterin dehydrogenase
0.38
0.29
Or look for
negative cofitness