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Cofit
Protein
Homologs
Top cofit genes for RR42_RS11705 from
Cupriavidus basilensis FW507-4G11
universal stress protein UspA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS01875
cytochrome C oxidase subunit II
no
0.37
2
RR42
_RS01915
cytochrome C oxidase subunit I
no
0.37
3
RR42
_RS12550
hypothetical protein
no
0.37
4
RR42
_RS29440
ABC transporter permease
no
0.37
5
RR42
_RS01895
MFS transporter
no
0.35
6
RR42
_RS27160
acetyl-CoA acetyltransferase
no
0.35
7
RR42
_RS25480
enoyl-CoA hydratase
no
0.35
8
RR42
_RS06095
hypothetical protein
no
0.34
9
RR42
_RS05405
serine/threonine protein phosphatase
no
0.34
10
RR42
_RS37045
thiamine biosynthesis protein ApbE
no
0.33
11
RR42
_RS16545
prolyl-tRNA synthetase
no
0.33
12
RR42
_RS01910
cytochrome C oxidase subunit I
no
0.33
13
RR42
_RS31285
XRE family transcriptional regulator
no
0.33
14
RR42
_RS01920
protoheme IX farnesyltransferase
no
0.32
15
RR42
_RS08915
nitrate reductase
no
0.32
16
RR42
_RS20560
TonB-dependent receptor
no
0.32
17
RR42
_RS09510
hypothetical protein
no
0.32
18
RR42
_RS18815
cytochrome C
no
0.32
19
RR42
_RS19695
cytochrome C protein
no
0.31
20
RR42
_RS18820
cytochrome B
no
0.31
Or look for
negative cofitness