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  • Top cofit genes for RR42_RS11130 from Cupriavidus basilensis FW507-4G11

    mannosyltransferase
    SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS11145 ABC transporter permease 0.75 0.84
    2 RR42_RS11150 branched-chain amino acid ABC transporter substrate-binding protein 0.83 0.83
    3 RR42_RS11140 ABC transporter permease 0.81 0.82
    4 RR42_RS11135 branched-chain amino acid ABC transporter substrate-binding protein 0.73 0.80
    5 RR42_RS11155 long-chain fatty acid--CoA ligase 0.72 0.80
    6 RR42_RS07540 ABC transporter permease no 0.76
    7 RR42_RS36695 heavy metal resistance protein CzcA no 0.74
    8 RR42_RS06395 TetR family transcriptional regulator no 0.72
    9 RR42_RS07545 branched-chain amino acid ABC transporter substrate-binding protein no 0.72
    10 RR42_RS07550 ABC transporter no 0.66
    11 RR42_RS10610 hypothetical protein no 0.66
    12 RR42_RS20380 histidine kinase no 0.66
    13 RR42_RS20375 transcriptional regulator no 0.65
    14 RR42_RS00380 GntR family transcriptional regulator no 0.64
    15 RR42_RS34870 hypothetical protein no 0.64
    16 RR42_RS07535 ABC transporter permease no 0.64
    17 RR42_RS36700 multidrug transporter no 0.64
    18 RR42_RS21430 alpha-ketoglutarate permease no 0.62
    19 RR42_RS21425 hypothetical protein no 0.61
    20 RR42_RS09100 transcriptional regulator no 0.61

    Or look for negative cofitness