Top cofit genes for RR42_RS11120 from Cupriavidus basilensis FW507-4G11

DNA-binding protein
SEED: YheO-like PAS domain

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS13935		hemin transporter	no	0.59
2	RR42_RS14080		RNA polymerase sigma factor RpoE	no	0.56
3	RR42_RS15800		aldo/keto reductase	no	0.53
4	RR42_RS17885		ABC transporter permease	0.40	0.52
5	RR42_RS15710		LPS biosynthesis protein	no	0.52
6	RR42_RS15770		hypothetical protein	no	0.52
7	RR42_RS15790		aminotransferase class III	no	0.51
8	RR42_RS03145		peptidase M48	no	0.51
9	RR42_RS22935		metal transporter	no	0.51
10	RR42_RS18840		2-alkenal reductase	no	0.49
11	RR42_RS15795		spore coat protein	no	0.49
12	RR42_RS27945		RNA chaperone Hfq	no	0.49
13	RR42_RS15070		membrane protein	no	0.49
14	RR42_RS36990		hemolysin III	0.40	0.49
15	RR42_RS22930		cytochrome C peroxidase	no	0.48
16	RR42_RS17865		N-acetyl-anhydromuranmyl-L-alanine amidase	0.48	0.48
17	RR42_RS13950		hypothetical protein	no	0.47
18	RR42_RS22920		hypothetical protein	no	0.47
19	RR42_RS15475		protein tolQ	no	0.46
20	RR42_RS36040		TonB-dependent receptor	no	0.46

Or look for negative cofitness